Method Prototype | Description | Parameters | Return Type |
getAllWheatMirs() | Return all wheat miRs available at PmiRExAtdatabase | No parameters | List |
getAllMaizeMirs() | Return all maize miRs available at PmiRExAtdatabase | No parameters | List |
getAllRiceMirs() | Return all rice miRs available at PmiRExAtdatabase | No parameters | List |
getAllWheatSequence() | Returns all Wheat sequence available at PmiRExAtdatabase | No parameters | List |
getAllMaizeSequence() | Returns all Maize sequence available at PmiRExAtdatabase | No parameters | List |
getAllRiceSequence() | Returns all Rice sequence available at PmiRExAtdatabase | No parameters | List |
getAllRiceDatasets() | To get all rice dataset available at PmiRExAtdatabase | No parameters | List |
getAllWheatDatasets() | To get all wheat dataset available at PmiRExAtdatabase | No parameters | List |
getAllMaizeDatasets() | To get all maize dataset available at PmiRExAtdatabase | No parameters | List |
getmiRidbysequene(String sequence) | To get miRids for a sequence available in PmiRExAtdatabase | String sequence (Takes sequence as parameter) Sequence should exist in PmiRExAt dataset records | List |
findmiRidbysequenceinWheat(String sequence) | To get miRid for a sequence available in PmiRExAtwheat database | String Sequence(Takes sequence as parameter) : sequence should exist in PmiRExAtWheat dataset records | String |
findmiRidbysequenceinMaize(String sequence) | To get miRid for a sequence available in PmiRExAtmaize database | String Sequence(Takes sequence as parameter): sequence should exist in PmiRExAtmaize dataset records | String |
findmiRidbysequenceinRice(String sequence) | To get miRid for a sequence available in PmiRExAtrice database | String Sequence(Takes sequence as parameter) : sequence should exist in PmiRExAtrice dataset records | String |
getSequencebymiRid(String miRid) | To find sequence for a miRid available in PmiRExAtdatabase | String miRid(Takes miRid as parameter) : miRid should exist in PmiRExAt dataset records | String |
searchdsbymiRid(String miRid,String Dataset) | To get expression count for datasets by mirId | String miRid(miRid),String Dataset(dataset name ) : miRid should exist in PmiRExAt records | Integer |
searchWheatDbbySequence(String sequence,String dataset) | To get expression count in wheat dataset by sequence | String sequence(sequence),String dataset(dataset name) : sequence and dataset name should exist in the wheat dataset | Integer |
searchRiceDbbySequence(String sequence,String dataset) | To get expression count in rice dataset by sequence | String sequence(sequence),String dataset(dataset name) : sequence and dataset name should exist in the wheat dataset | Integer |
searchMaizeDbbySequence(String sequence,String dataset) | To get expression count in maize dataset by sequence | String sequence(sequence),String dataset(dataset name) :sequence and dataset name should exist in the wheat dataset | Integer |
getalltisssuesinwheat() | To get list of all tissues present in wheat datasets | No parameters | List |
getalltissuesinMaize() | To get list of all tissues present in maize datasets | No parameters | List |
getalltissuesinRice() | To get list of all tissues present in rice datasets | No parameters | List |
getdsfortissueinwheat(String tissue) | To get list of all datasets of a spciefic tissue in wheat | String tissue(tissue name ) : should exist in wheat dataset | List |
getdsfortissueinMaize(String tissue) | To get list of all datasets of a spciefic tissue in maize | String tissue(tissue name ): should exist in maize dataset | List |
getdsfortissueinRice(String tissue) | To get list of all datasets of a spciefic tissue in rice | String tissue(tissue name) :should exist in rice dataset | List |